CRISPRone

CRISPRone report for SRR9713640

♦ Seq 1: NODE_3_length_477996_cov_13.318435

⇒Summary: seq-len = 477996 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 370294-373907 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 370294-371193 bp Gene: unk Type: unknown Location: 371190-372455 bp Gene: unk Type: unknown Location: 372463-373236 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 373239-373907 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_2_length_478533_cov_12.288527

⇒Summary: seq-len = 478533 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 432917-447555 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 432917-433648 bp Gene: unk Type: unknown Location: 433666-434292 bp Gene: unk Type: unknown Location: 434268-435047 bp Gene: cash17:cash17 Type: Type- Location: 435092-436519 bp Gene: unk Type: unknown Location: 436516-436995 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 437009-438418 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 438423-440225 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 440218-441357 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 441377-442216 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 442229-442639 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 442636-443586 bp Gene: cd09634:cas1 Type: universal Location: 443606-445876 bp Gene: cd09725:cas2 Type: universal Location: 445870-446160 bp CRISPR array Location: 446608-447555 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 446608-447555 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 446608-447555 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)