CRISPRone

CRISPRone report for SRR9713662

♦ Seq 1: NODE_218_length_7448_cov_4.488300

⇒Summary: seq-len = 7448 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2426-6039 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 2426-3325 bp Gene: unk Type: unknown Location: 3322-4587 bp Gene: unk Type: unknown Location: 4595-5368 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 5371-6039 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_326_length_5487_cov_3.590206

⇒Summary: seq-len = 5487 bp; # of CRISPR array = 1; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 55-4012 bp Zoom in on locus 1 x14 Gene: cd09634:cas1 Type: universal Location: 55-2325 bp CRISPR array Location: 3057-4012 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 3057-4012 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3057-4012 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_398_length_4408_cov_4.086837

⇒Summary: seq-len = 4408 bp; # of CRISPR array = 0; # of cas gene = 5  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-4407 bp Zoom in on locus 1 Gene: cd09679:cas10 Type: Type-III Location: 3-1064 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1057-2196 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2216-3055 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3068-3478 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3475-4407 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_927_length_776_cov_3.425798

⇒Summary: seq-len = 776 bp; # of CRISPR array = 0; # of cas gene = 1  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-758 bp Zoom in on locus 1 Gene: pfam12469:cas10 Type: Subtype-III-B Location: 3-758 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)