CRISPRone

CRISPRone report for SRR9713663

♦ Seq 1: NODE_212_length_7368_cov_3.831533

⇒Summary: seq-len = 7368 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111-5549 bp Zoom in on locus 1 Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 111-1520 bp Gene: unk Type: unknown Location: 1534-2013 bp Gene: cash17:cash17 Type: Type- Location: 2010-3437 bp Gene: unk Type: unknown Location: 3482-4261 bp Gene: unk Type: unknown Location: 4237-4863 bp Gene: cls000004:cas6 Type: other Location: 4881-5549 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_191_length_8032_cov_3.963520

⇒Summary: seq-len = 8032 bp; # of CRISPR array = 0; # of cas gene = 6  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 700-8030 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 700-2970 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2990-3934 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3937-4347 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4360-5199 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5219-6358 bp Gene: cls000742:cas10 Type: Type-III Location: 6351-8030 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_28_length_19583_cov_3.874590

⇒Summary: seq-len = 19583 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15720-19333 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 15720-16388 bp Gene: unk Type: unknown Location: 16391-17164 bp Gene: unk Type: unknown Location: 17172-18437 bp Gene: pfam13280:WYL Type: other Location: 18434-19333 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_399_length_4110_cov_4.446116

⇒Summary: seq-len = 4110 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3119-4072 bp Zoom in on locus 1 x14 CRISPR array Location: 3119-4072 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 3119-4072 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3119-4072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)