CRISPRone

CRISPRone report for SRR9713664

♦ Seq 1: NODE_6_length_187668_cov_7.222570

⇒Summary: seq-len = 187668 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 39628-43241 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 39628-40527 bp Gene: unk Type: unknown Location: 40524-41789 bp Gene: unk Type: unknown Location: 41797-42570 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 42573-43241 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_20_length_88420_cov_6.711141

⇒Summary: seq-len = 88420 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42143-56789 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 42143-42874 bp Gene: unk Type: unknown Location: 42892-43518 bp Gene: unk Type: unknown Location: 43494-44273 bp Gene: cash17:cash17 Type: Type- Location: 44318-45745 bp Gene: unk Type: unknown Location: 45742-46221 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 46235-47644 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 47649-49451 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 49444-50583 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 50603-51442 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 51455-51865 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 51862-52812 bp Gene: cd09634:cas1 Type: universal Location: 52832-55102 bp Gene: cd09725:cas2 Type: universal Location: 55096-55386 bp CRISPR array Location: 55834-56789 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 55834-56789 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 55834-56789 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)