CRISPRone

CRISPRone report for SRR9713669

♦ Seq 1: NODE_49_length_32600_cov_8.573391

⇒Summary: seq-len = 32600 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36-991 bp Zoom in on locus 1 x14 CRISPR array Location: 36-991 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 36-991 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 36-991 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_13_length_109706_cov_8.410968

⇒Summary: seq-len = 109706 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 665-13561 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 665-2935 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2955-3905 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3902-4312 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4325-5164 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5184-6323 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6316-8118 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8123-9532 bp Gene: unk Type: unknown Location: 9546-10025 bp Gene: cash17:cash17 Type: Type- Location: 10022-11449 bp Gene: unk Type: unknown Location: 11494-12273 bp Gene: unk Type: unknown Location: 12249-12875 bp Gene: cls000004:cas6 Type: other Location: 12893-13561 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_15_length_99688_cov_10.023566

⇒Summary: seq-len = 99688 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14367-17980 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 14367-15035 bp Gene: unk Type: unknown Location: 15038-15811 bp Gene: unk Type: unknown Location: 15819-17084 bp Gene: pfam13280:WYL Type: other Location: 17081-17980 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)