CRISPRone

CRISPRone report for SRR9713670

♦ Seq 1: NODE_22_length_82017_cov_47.541287

⇒Summary: seq-len = 82017 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 45118-59764 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 45118-45849 bp Gene: unk Type: unknown Location: 45867-46493 bp Gene: unk Type: unknown Location: 46469-47248 bp Gene: cash17:cash17 Type: Type- Location: 47293-48720 bp Gene: unk Type: unknown Location: 48717-49196 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 49210-50619 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 50624-52426 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 52419-53558 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 53578-54417 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 54430-54840 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 54837-55787 bp Gene: cd09634:cas1 Type: universal Location: 55807-58077 bp Gene: cd09725:cas2 Type: universal Location: 58071-58361 bp CRISPR array Location: 58809-59764 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 58809-59764 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 58809-59764 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_10_length_189807_cov_70.857087

⇒Summary: seq-len = 189807 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83969-87582 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 83969-84868 bp Gene: unk Type: unknown Location: 84865-86130 bp Gene: unk Type: unknown Location: 86138-86911 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 86914-87582 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)