CRISPRone

CRISPRone report for SRR9713680

♦ Seq 1: NODE_660_length_334_cov_1.125448

⇒Summary: seq-len = 334 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23-331 bp Zoom in on locus 1 Gene: pfam09827:cas2 Type: universal Location: 23-331 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_477996_cov_31.927087

⇒Summary: seq-len = 477996 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 370294-373907 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 370294-371193 bp Gene: unk Type: unknown Location: 371190-372455 bp Gene: unk Type: unknown Location: 372463-373236 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 373239-373907 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_13_length_141102_cov_30.111254

⇒Summary: seq-len = 141102 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 95486-110124 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 95486-96217 bp Gene: unk Type: unknown Location: 96235-96861 bp Gene: unk Type: unknown Location: 96837-97616 bp Gene: cash17:cash17 Type: Type- Location: 97661-99088 bp Gene: unk Type: unknown Location: 99085-99564 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 99578-100987 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 100992-102794 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 102787-103926 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 103946-104785 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 104798-105208 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 105205-106155 bp Gene: cd09634:cas1 Type: universal Location: 106175-108445 bp Gene: cd09725:cas2 Type: universal Location: 108439-108729 bp CRISPR array Location: 109177-110124 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 109177-110124 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 109177-110124 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)