CRISPRone

CRISPRone report for SRR9713683

♦ Seq 1: NODE_4_length_320443_cov_20.319940

⇒Summary: seq-len = 320443 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 274827-289465 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 274827-275558 bp Gene: unk Type: unknown Location: 275576-276202 bp Gene: unk Type: unknown Location: 276178-276957 bp Gene: cash17:cash17 Type: Type- Location: 277002-278429 bp Gene: unk Type: unknown Location: 278426-278905 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 278919-280328 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 280333-282135 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 282128-283267 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 283287-284126 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 284139-284549 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 284546-285496 bp Gene: cd09634:cas1 Type: universal Location: 285516-287786 bp Gene: cd09725:cas2 Type: universal Location: 287780-288070 bp CRISPR array Location: 288518-289465 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 288518-289465 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 288518-289465 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_454277_cov_21.712290

⇒Summary: seq-len = 454277 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 346575-350188 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 346575-347474 bp Gene: unk Type: unknown Location: 347471-348736 bp Gene: unk Type: unknown Location: 348744-349517 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 349520-350188 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_263_length_448_cov_0.844784

⇒Summary: seq-len = 448 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-447 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 1-447 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)