CRISPRone

CRISPRone report for SRR9713686

♦ Seq 1: NODE_55_length_32597_cov_35.703061

⇒Summary: seq-len = 32597 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 11-966 bp Zoom in on locus 1 x14 CRISPR array Location: 11-966 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 11-966 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 11-966 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_30_length_57193_cov_31.388253

⇒Summary: seq-len = 57193 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 552-13448 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 552-2822 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2842-3792 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3789-4199 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4212-5051 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5071-6210 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6203-8005 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8010-9419 bp Gene: unk Type: unknown Location: 9433-9912 bp Gene: cash17:cash17 Type: Type- Location: 9909-11336 bp Gene: unk Type: unknown Location: 11381-12160 bp Gene: unk Type: unknown Location: 12136-12762 bp Gene: cls000004:cas6 Type: other Location: 12780-13448 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_2_length_249434_cov_48.503030

⇒Summary: seq-len = 249434 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 101394-105007 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 101394-102293 bp Gene: unk Type: unknown Location: 102290-103555 bp Gene: unk Type: unknown Location: 103563-104336 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 104339-105007 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)