CRISPRone

CRISPRone report for SRR9713727

♦ Seq 1: NODE_9_length_141097_cov_15.192106

⇒Summary: seq-len = 141097 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94815-109461 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 94815-95546 bp Gene: unk Type: unknown Location: 95564-96190 bp Gene: unk Type: unknown Location: 96166-96945 bp Gene: cash17:cash17 Type: Type- Location: 96990-98417 bp Gene: unk Type: unknown Location: 98414-98893 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 98907-100316 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 100321-102123 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 102116-103255 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 103275-104114 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 104127-104537 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 104534-105484 bp Gene: cd09634:cas1 Type: universal Location: 105504-107774 bp Gene: cd09725:cas2 Type: universal Location: 107768-108058 bp CRISPR array Location: 108506-109461 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 108506-109461 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 108506-109461 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_8_length_154427_cov_16.693947

⇒Summary: seq-len = 154427 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 140737-144350 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 140737-141405 bp Gene: unk Type: unknown Location: 141408-142181 bp Gene: unk Type: unknown Location: 142189-143454 bp Gene: pfam13280:WYL Type: other Location: 143451-144350 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)