CRISPRone

CRISPRone report for SRR9713728

♦ Seq 1: NODE_8_length_157554_cov_25.771497

⇒Summary: seq-len = 157554 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10078-13691 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10078-10977 bp Gene: unk Type: unknown Location: 10974-12239 bp Gene: unk Type: unknown Location: 12247-13020 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13023-13691 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_9_length_140991_cov_22.491230

⇒Summary: seq-len = 140991 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31638-46220 bp Zoom in on locus 1 x14 CRISPR array Location: 31638-32592 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31638-32592 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 33324-35594 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 35614-36564 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 36561-36971 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 36984-37823 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 37843-38982 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 38975-40777 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 40782-42191 bp Gene: unk Type: unknown Location: 42205-42684 bp Gene: cash17:cash17 Type: Type- Location: 42681-44108 bp Gene: unk Type: unknown Location: 44153-44932 bp Gene: unk Type: unknown Location: 44908-45534 bp Gene: cls000004:cas6 Type: other Location: 45552-46220 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31638-32592 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)