CRISPRone

CRISPRone report for SRR9713732

♦ Seq 1: NODE_1_length_524993_cov_10.998966

⇒Summary: seq-len = 524993 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 144392-148005 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 144392-145060 bp Gene: unk Type: unknown Location: 145063-145836 bp Gene: unk Type: unknown Location: 145844-147109 bp Gene: pfam13280:WYL Type: other Location: 147106-148005 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_4_length_328212_cov_9.696231

⇒Summary: seq-len = 328212 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 281935-296581 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 281935-282666 bp Gene: unk Type: unknown Location: 282684-283310 bp Gene: unk Type: unknown Location: 283286-284065 bp Gene: cash17:cash17 Type: Type- Location: 284110-285537 bp Gene: unk Type: unknown Location: 285534-286013 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 286027-287436 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 287441-289243 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 289236-290375 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 290395-291234 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 291247-291657 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 291654-292604 bp Gene: cd09634:cas1 Type: universal Location: 292624-294894 bp Gene: cd09725:cas2 Type: universal Location: 294888-295178 bp CRISPR array Location: 295626-296581 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 295626-296581 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 295626-296581 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)