CRISPRone

CRISPRone report for SRR9713751

♦ Seq 1: NODE_4_length_399671_cov_14.317082

⇒Summary: seq-len = 399671 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 272530-276143 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 272530-273429 bp Gene: unk Type: unknown Location: 273426-274691 bp Gene: unk Type: unknown Location: 274699-275472 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 275475-276143 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_7_length_223367_cov_15.812912

⇒Summary: seq-len = 223367 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 964-9191 bp Zoom in on locus 1 x20 CRISPR array Location: 964-2469 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 964-2469 bp Num of repeats: 20 Spacers: s1-s19 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2578-2910 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2914-3846 bp Gene: unk Type: unknown Location: 3966-4274 bp Gene: unk Type: unknown Location: 4341-4865 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4881-9191 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 964-2469 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_1_length_645840_cov_13.066950

⇒Summary: seq-len = 645840 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 453359-463077 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 453359-459499 bp Gene: pfam13280:WYL Type: other Location: 459538-460548 bp Gene: unk Type: unknown Location: 461314-461490 bp Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 461827-463077 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)