CRISPRone

CRISPRone report for SRR9713760

♦ Seq 1: NODE_25_length_48184_cov_5.122109

⇒Summary: seq-len = 48184 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2081-16727 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 2081-2812 bp Gene: unk Type: unknown Location: 2830-3456 bp Gene: unk Type: unknown Location: 3432-4211 bp Gene: cash17:cash17 Type: Type- Location: 4256-5683 bp Gene: unk Type: unknown Location: 5680-6159 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 6173-7582 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 7587-9389 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 9382-10521 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 10541-11380 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 11393-11803 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 11800-12750 bp Gene: cd09634:cas1 Type: universal Location: 12770-15040 bp CRISPR array Location: 15772-16727 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 15772-16727 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 15772-16727 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_17_length_56844_cov_5.610823

⇒Summary: seq-len = 56844 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22150-25763 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 22150-22818 bp Gene: unk Type: unknown Location: 22821-23594 bp Gene: unk Type: unknown Location: 23602-24867 bp Gene: pfam13280:WYL Type: other Location: 24864-25763 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)