CRISPRone

CRISPRone report for SRR9713761

♦ Seq 1: NODE_9_length_154427_cov_17.646536

⇒Summary: seq-len = 154427 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10078-13691 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10078-10977 bp Gene: unk Type: unknown Location: 10974-12239 bp Gene: unk Type: unknown Location: 12247-13020 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13023-13691 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_1_length_363126_cov_15.582729

⇒Summary: seq-len = 363126 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 316849-331495 bp Zoom in on locus 1 x14 Gene: cls000004:cas6 Type: other Location: 316849-317580 bp Gene: unk Type: unknown Location: 317598-318224 bp Gene: unk Type: unknown Location: 318200-318979 bp Gene: cash17:cash17 Type: Type- Location: 319024-320451 bp Gene: unk Type: unknown Location: 320448-320927 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 320941-322350 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 322355-324157 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 324150-325289 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 325309-326148 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 326161-326571 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 326568-327518 bp Gene: cd09634:cas1 Type: universal Location: 327538-329808 bp Gene: cd09725:cas2 Type: universal Location: 329802-330092 bp CRISPR array Location: 330540-331495 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 330540-331495 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 330540-331495 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)