CRISPRone

CRISPRone report for SRR9713765

♦ Seq 1: NODE_8_length_157554_cov_14.062388

⇒Summary: seq-len = 157554 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 10078-13691 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 10078-10977 bp Gene: unk Type: unknown Location: 10974-12239 bp Gene: unk Type: unknown Location: 12247-13020 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 13023-13691 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_53_length_31881_cov_12.570760

⇒Summary: seq-len = 31881 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-245 bp Zoom in on locus 1 x4 CRISPR array Location: 0-245 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 0-245 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-245 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_14_length_109260_cov_12.846014

⇒Summary: seq-len = 109260 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12-14382 bp Zoom in on locus 1 x11 CRISPR array Location: 12-754 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 12-754 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09634:cas1 Type: universal Location: 1486-3756 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3776-4726 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 4723-5133 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 5146-5985 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 6005-7144 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 7137-8939 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8944-10353 bp Gene: unk Type: unknown Location: 10367-10846 bp Gene: cash17:cash17 Type: Type- Location: 10843-12270 bp Gene: unk Type: unknown Location: 12315-13094 bp Gene: unk Type: unknown Location: 13070-13696 bp Gene: cls000004:cas6 Type: other Location: 13714-14382 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12-754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)