CRISPRone

CRISPRone report for SRR9713768

♦ Seq 1: NODE_3_length_330331_cov_8.225302

⇒Summary: seq-len = 330331 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 713-13609 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 713-2983 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3003-3953 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3950-4360 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4373-5212 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5232-6371 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6364-8166 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8171-9580 bp Gene: unk Type: unknown Location: 9594-10073 bp Gene: cash17:cash17 Type: Type- Location: 10070-11497 bp Gene: unk Type: unknown Location: 11542-12321 bp Gene: unk Type: unknown Location: 12297-12923 bp Gene: cls000004:cas6 Type: other Location: 12941-13609 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_56_length_694_cov_9.658842

⇒Summary: seq-len = 694 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43-717 bp Zoom in on locus 1 x10 CRISPR array Location: 43-717 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 43-717 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 43-717 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_2_length_525038_cov_9.176158

⇒Summary: seq-len = 525038 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 144428-148041 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 144428-145096 bp Gene: unk Type: unknown Location: 145099-145872 bp Gene: unk Type: unknown Location: 145880-147145 bp Gene: pfam13280:WYL Type: other Location: 147142-148041 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NODE_34_length_31962_cov_8.311123

⇒Summary: seq-len = 31962 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-31948 bp Zoom in on locus 1 x5 CRISPR array Location: 31633-31948 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 31633-31948 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31633-31948 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)