CRISPRone

CRISPRone report for SRR9713770

♦ Seq 1: NODE_113_length_14984_cov_4.130953

⇒Summary: seq-len = 14984 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14027-14981 bp Zoom in on locus 1 x14 CRISPR array Location: 14027-14981 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 14027-14981 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 14027-14981 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_82_length_18246_cov_4.542961

⇒Summary: seq-len = 18246 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13775-17388 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 13775-14674 bp Gene: unk Type: unknown Location: 14671-15936 bp Gene: unk Type: unknown Location: 15944-16717 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 16720-17388 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_25_length_30648_cov_4.044291

⇒Summary: seq-len = 30648 bp; # of CRISPR array = 0; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 747-13643 bp Zoom in on locus 1 Gene: cd09634:cas1 Type: universal Location: 747-3017 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 3037-3987 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3984-4394 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4407-5246 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5266-6405 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 6398-8200 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 8205-9614 bp Gene: unk Type: unknown Location: 9628-10107 bp Gene: cash17:cash17 Type: Type- Location: 10104-11531 bp Gene: unk Type: unknown Location: 11576-12355 bp Gene: unk Type: unknown Location: 12331-12957 bp Gene: cls000004:cas6 Type: other Location: 12975-13643 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)