CRISPRone

CRISPRone report for SRR9713772

♦ Seq 1: NODE_62_length_32647_cov_7.397183

⇒Summary: seq-len = 32647 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 56-1011 bp Zoom in on locus 1 x14 CRISPR array Location: 56-1011 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 56-1011 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 56-1011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_86_length_12216_cov_7.333525

⇒Summary: seq-len = 12216 bp; # of CRISPR array = 0; # of cas gene = 8  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 755-11539 bp Zoom in on locus 1 Gene: cash17:cash17 Type: Type- Location: 755-2182 bp Gene: unk Type: unknown Location: 2179-2658 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 2672-4081 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 4086-5888 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 5881-7020 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 7040-7879 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 7892-8302 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 8305-9249 bp Gene: cd09634:cas1 Type: universal Location: 9269-11539 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_2_length_157474_cov_8.542381

⇒Summary: seq-len = 157474 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9434-13047 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 9434-10333 bp Gene: unk Type: unknown Location: 10330-11595 bp Gene: unk Type: unknown Location: 11603-12376 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 12379-13047 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)