CRISPRone

CRISPRone report for SRR9713775

♦ Seq 1: NODE_6_length_274221_cov_8.047865

⇒Summary: seq-len = 274221 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 127018-130631 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 127018-127917 bp Gene: unk Type: unknown Location: 127914-129179 bp Gene: unk Type: unknown Location: 129187-129960 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 129963-130631 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NODE_122_length_131_cov_0.592105

⇒Summary: seq-len = 131 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8-130 bp Zoom in on locus 1 x2 CRISPR array Location: 8-130 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 8-130 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8-130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NODE_24_length_70267_cov_7.501410

⇒Summary: seq-len = 70267 bp; # of CRISPR array = 1; # of cas gene = 9  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31633-46215 bp Zoom in on locus 1 x14 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 31633-32587 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09634:cas1 Type: universal Location: 33319-35589 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 35609-36559 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 36556-36966 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 36979-37818 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 37838-38977 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 38970-40772 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 40777-42186 bp Gene: unk Type: unknown Location: 42200-42679 bp Gene: cash17:cash17 Type: Type- Location: 42676-44103 bp Gene: unk Type: unknown Location: 44148-44927 bp Gene: unk Type: unknown Location: 44903-45529 bp Gene: cls000004:cas6 Type: other Location: 45547-46215 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 31633-32587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)