CRISPRone

CRISPRone report for GCA_000193655.2_ASM19365v2

♦ Seq 1: ADEH01000026.1 Clostridioides difficile 6407 contig_26, whole genome shotgun sequence

⇒Summary: seq-len = 553 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 220-445 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: ADEH01003422.1 Clostridioides difficile 6407 contig_3422, whole genome shotgun sequence

⇒Summary: seq-len = 1101 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7-363 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: ADEH01001731.1 Clostridioides difficile 6407 contig_1731, whole genome shotgun sequence

⇒Summary: seq-len = 2706 bp; # of CRISPR array = 0; # of cas gene = 4  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: ADEH01003138.1 Clostridioides difficile 6407 contig_3138, whole genome shotgun sequence

⇒Summary: seq-len = 305 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33-315 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: ADEH01000021.1 Clostridioides difficile 6407 contig_21, whole genome shotgun sequence

⇒Summary: seq-len = 807 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 392-807 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: ADEH01003400.1 Clostridioides difficile 6407 contig_3400, whole genome shotgun sequence

⇒Summary: seq-len = 411 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-155 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: ADEH01000341.1 Clostridioides difficile 6407 contig_341, whole genome shotgun sequence

⇒Summary: seq-len = 2340 bp; # of CRISPR array = 0; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: ADEH01001907.1 Clostridioides difficile 6407 contig_1907, whole genome shotgun sequence

⇒Summary: seq-len = 807 bp; # of CRISPR array = 0; # of cas gene = 1  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: ADEH01000015.1 Clostridioides difficile 6407 contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 306 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-276 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: ADEH01001129.1 Clostridioides difficile 6407 contig_1129, whole genome shotgun sequence

⇒Summary: seq-len = 509 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21-510 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: ADEH01003143.1 Clostridioides difficile 6407 contig_3143, whole genome shotgun sequence

⇒Summary: seq-len = 886 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 161-850 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: ADEH01000547.1 Clostridioides difficile 6407 contig_547, whole genome shotgun sequence

⇒Summary: seq-len = 773 bp; # of CRISPR array = 0; # of cas gene = 1  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: ADEH01003582.1 Clostridioides difficile 6407 contig_3582, whole genome shotgun sequence

⇒Summary: seq-len = 522 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31-523 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: ADEH01003398.1 Clostridioides difficile 6407 contig_3398, whole genome shotgun sequence

⇒Summary: seq-len = 1832 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 27-270 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: ADEH01000014.1 Clostridioides difficile 6407 contig_14, whole genome shotgun sequence

⇒Summary: seq-len = 597 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 84-575 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 16: ADEH01000016.1 Clostridioides difficile 6407 contig_16, whole genome shotgun sequence

⇒Summary: seq-len = 708 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 75-685 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)