CRISPRone

CRISPRone report for GCA_001896395.1_ASM189639v1

♦ Seq 1: MPDV01000044.1 Clostridioides difficile strain NT422 contig_44, whole genome shotgun sequence

⇒Summary: seq-len = 28467 bp; # of CRISPR array = 0; # of cas gene = 5  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPDV01001116.1 Clostridioides difficile strain NT422 contig_1116, whole genome shotgun sequence

⇒Summary: seq-len = 315 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2-160 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPDV01000094.1 Clostridioides difficile strain NT422 contig_94, whole genome shotgun sequence

⇒Summary: seq-len = 495 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 187-481 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPDV01000632.1 Clostridioides difficile strain NT422 contig_632, whole genome shotgun sequence

⇒Summary: seq-len = 836 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61-413 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPDV01000432.1 Clostridioides difficile strain NT422 contig_432, whole genome shotgun sequence

⇒Summary: seq-len = 9674 bp; # of CRISPR array = 1; # of cas gene = 6  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 4229-5570 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPDV01000380.1 Clostridioides difficile strain NT422 contig_380, whole genome shotgun sequence

⇒Summary: seq-len = 283 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-296 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPDV01001156.1 Clostridioides difficile strain NT422 contig_1156, whole genome shotgun sequence

⇒Summary: seq-len = 1834 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1617-1845 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPDV01000528.1 Clostridioides difficile strain NT422 contig_528, whole genome shotgun sequence

⇒Summary: seq-len = 3229 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-283 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPDV01000381.1 Clostridioides difficile strain NT422 contig_381, whole genome shotgun sequence

⇒Summary: seq-len = 1082 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 32-723 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPDV01000529.1 Clostridioides difficile strain NT422 contig_529, whole genome shotgun sequence

⇒Summary: seq-len = 2062 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1357-1516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPDV01000234.1 Clostridioides difficile strain NT422 contig_234, whole genome shotgun sequence

⇒Summary: seq-len = 6786 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2741-3499 bp]: array | spacers
           [Locus range 5146-5502 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: MPDV01000567.1 Clostridioides difficile strain NT422 contig_567, whole genome shotgun sequence

⇒Summary: seq-len = 2013 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 215-1231 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: MPDV01000118.1 Clostridioides difficile strain NT422 contig_118, whole genome shotgun sequence

⇒Summary: seq-len = 3941 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: MPDV01000095.1 Clostridioides difficile strain NT422 contig_95, whole genome shotgun sequence

⇒Summary: seq-len = 946 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 442-862 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)