CRISPRone

CRISPRone report for GCA_001896405.1_ASM189640v1

♦ Seq 1: MPDU01001448.1 Clostridioides difficile strain NT049 contig_1449, whole genome shotgun sequence

⇒Summary: seq-len = 323 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42-334 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPDU01000431.1 Clostridioides difficile strain NT049 contig_431, whole genome shotgun sequence

⇒Summary: seq-len = 1808 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1182-1803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPDU01000411.1 Clostridioides difficile strain NT049 contig_411, whole genome shotgun sequence

⇒Summary: seq-len = 4641 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4055-4607 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPDU01000671.1 Clostridioides difficile strain NT049 contig_671, whole genome shotgun sequence

⇒Summary: seq-len = 3290 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-143 bp]: array | spacers
           [Locus range 1795-2553 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPDU01000858.1 Clostridioides difficile strain NT049 contig_858, whole genome shotgun sequence

⇒Summary: seq-len = 7668 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPDU01000451.1 Clostridioides difficile strain NT049 contig_451, whole genome shotgun sequence

⇒Summary: seq-len = 6205 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5920-6155 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPDU01000097.1 Clostridioides difficile strain NT049 contig_97, whole genome shotgun sequence

⇒Summary: seq-len = 2194 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182-425 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPDU01000490.1 Clostridioides difficile strain NT049 contig_490, whole genome shotgun sequence

⇒Summary: seq-len = 1974 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1386-1742 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPDU01001138.1 Clostridioides difficile strain NT049 contig_1138, whole genome shotgun sequence

⇒Summary: seq-len = 1316 bp; # of CRISPR array = 1; # of cas gene = 2  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 788-1274 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPDU01000775.1 Clostridioides difficile strain NT049 contig_775, whole genome shotgun sequence

⇒Summary: seq-len = 1826 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 444-1195 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPDU01000485.1 Clostridioides difficile strain NT049 contig_485, whole genome shotgun sequence

⇒Summary: seq-len = 799 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 168-457 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: MPDU01000410.1 Clostridioides difficile strain NT049 contig_410, whole genome shotgun sequence

⇒Summary: seq-len = 707 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-410 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: MPDU01000798.1 Clostridioides difficile strain NT049 contig_798, whole genome shotgun sequence

⇒Summary: seq-len = 1140 bp; # of CRISPR array = 0; # of cas gene = 2  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: MPDU01000626.1 Clostridioides difficile strain NT049 contig_626, whole genome shotgun sequence

⇒Summary: seq-len = 4406 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2629-2823 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: MPDU01000059.1 Clostridioides difficile strain NT049 contig_59, whole genome shotgun sequence

⇒Summary: seq-len = 7659 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2969-4052 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 16: MPDU01000448.1 Clostridioides difficile strain NT049 contig_448, whole genome shotgun sequence

⇒Summary: seq-len = 8305 bp; # of CRISPR array = 0; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 17: MPDU01001427.1 Clostridioides difficile strain NT049 contig_1428, whole genome shotgun sequence

⇒Summary: seq-len = 440 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 210-436 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)