CRISPRone

CRISPRone report for GCA_001896425.1_ASM189642v1

♦ Seq 1: MPDX01001237.1 Clostridioides difficile strain NT2700 contig_1238, whole genome shotgun sequence

⇒Summary: seq-len = 2175 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPDX01000600.1 Clostridioides difficile strain NT2700 contig_600, whole genome shotgun sequence

⇒Summary: seq-len = 7203 bp; # of CRISPR array = 1; # of cas gene = 6  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 3921-5262 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPDX01000399.1 Clostridioides difficile strain NT2700 contig_399, whole genome shotgun sequence

⇒Summary: seq-len = 3979 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3769-3943 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPDX01000925.1 Clostridioides difficile strain NT2700 contig_925, whole genome shotgun sequence

⇒Summary: seq-len = 1861 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 27-381 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPDX01000083.1 Clostridioides difficile strain NT2700 contig_83, whole genome shotgun sequence

⇒Summary: seq-len = 4326 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3615-4305 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPDX01000860.1 Clostridioides difficile strain NT2700 contig_860, whole genome shotgun sequence

⇒Summary: seq-len = 4823 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-217 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPDX01001208.1 Clostridioides difficile strain NT2700 contig_1209, whole genome shotgun sequence

⇒Summary: seq-len = 933 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 571-730 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPDX01001238.1 Clostridioides difficile strain NT2700 contig_1239, whole genome shotgun sequence

⇒Summary: seq-len = 666 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16-570 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPDX01000419.1 Clostridioides difficile strain NT2700 contig_419, whole genome shotgun sequence

⇒Summary: seq-len = 14907 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPDX01001481.1 Clostridioides difficile strain NT2700 contig_1485, whole genome shotgun sequence

⇒Summary: seq-len = 205 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-152 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPDX01000061.1 Clostridioides difficile strain NT2700 contig_61, whole genome shotgun sequence

⇒Summary: seq-len = 1770 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1034-1656 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: MPDX01001047.1 Clostridioides difficile strain NT2700 contig_1048, whole genome shotgun sequence

⇒Summary: seq-len = 1064 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 515-804 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: MPDX01000030.1 Clostridioides difficile strain NT2700 contig_30, whole genome shotgun sequence

⇒Summary: seq-len = 8666 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4032-4388 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: MPDX01000359.1 Clostridioides difficile strain NT2700 contig_359, whole genome shotgun sequence

⇒Summary: seq-len = 2873 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1210-1566 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: MPDX01000310.1 Clostridioides difficile strain NT2700 contig_310, whole genome shotgun sequence

⇒Summary: seq-len = 10886 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5244-5438 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 16: MPDX01000244.1 Clostridioides difficile strain NT2700 contig_244, whole genome shotgun sequence

⇒Summary: seq-len = 7087 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 17: MPDX01000482.1 Clostridioides difficile strain NT2700 contig_482, whole genome shotgun sequence

⇒Summary: seq-len = 3386 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 504-795 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 18: MPDX01000841.1 Clostridioides difficile strain NT2700 contig_841, whole genome shotgun sequence

⇒Summary: seq-len = 478 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23-446 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)