CRISPRone

CRISPRone report for GCA_001896455.1_ASM189645v1

♦ Seq 1: MPDY01000334.1 Clostridioides difficile strain NT513 contig_334, whole genome shotgun sequence

⇒Summary: seq-len = 7079 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPDY01001539.1 Clostridioides difficile strain NT513 contig_1540, whole genome shotgun sequence

⇒Summary: seq-len = 278 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16-243 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPDY01000418.1 Clostridioides difficile strain NT513 contig_419, whole genome shotgun sequence

⇒Summary: seq-len = 7915 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPDY01000025.1 Clostridioides difficile strain NT513 contig_25, whole genome shotgun sequence

⇒Summary: seq-len = 8355 bp; # of CRISPR array = 0; # of cas gene = 6  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPDY01000109.1 Clostridioides difficile strain NT513 contig_109, whole genome shotgun sequence

⇒Summary: seq-len = 9827 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6461-6704 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPDY01000529.1 Clostridioides difficile strain NT513 contig_530, whole genome shotgun sequence

⇒Summary: seq-len = 2463 bp; # of CRISPR array = 0; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPDY01001141.1 Clostridioides difficile strain NT513 contig_1142, whole genome shotgun sequence

⇒Summary: seq-len = 361 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24-183 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPDY01000299.1 Clostridioides difficile strain NT513 contig_299, whole genome shotgun sequence

⇒Summary: seq-len = 3401 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10-368 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPDY01000283.1 Clostridioides difficile strain NT513 contig_283, whole genome shotgun sequence

⇒Summary: seq-len = 1199 bp; # of CRISPR array = 1; # of cas gene = 2  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 0-279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPDY01000288.1 Clostridioides difficile strain NT513 contig_288, whole genome shotgun sequence

⇒Summary: seq-len = 1267 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 883-1243 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPDY01000669.1 Clostridioides difficile strain NT513 contig_670, whole genome shotgun sequence

⇒Summary: seq-len = 312 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 36-289 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: MPDY01000736.1 Clostridioides difficile strain NT513 contig_737, whole genome shotgun sequence

⇒Summary: seq-len = 357 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40-340 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: MPDY01000887.1 Clostridioides difficile strain NT513 contig_888, whole genome shotgun sequence

⇒Summary: seq-len = 211 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 39-199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: MPDY01000637.1 Clostridioides difficile strain NT513 contig_638, whole genome shotgun sequence

⇒Summary: seq-len = 3825 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3510-3808 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: MPDY01000275.1 Clostridioides difficile strain NT513 contig_275, whole genome shotgun sequence

⇒Summary: seq-len = 236 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-219 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 16: MPDY01001184.1 Clostridioides difficile strain NT513 contig_1185, whole genome shotgun sequence

⇒Summary: seq-len = 200 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53-202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 17: MPDY01000604.1 Clostridioides difficile strain NT513 contig_605, whole genome shotgun sequence

⇒Summary: seq-len = 3922 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 41-267 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 18: MPDY01001140.1 Clostridioides difficile strain NT513 contig_1141, whole genome shotgun sequence

⇒Summary: seq-len = 361 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23-182 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 19: MPDY01000324.1 Clostridioides difficile strain NT513 contig_324, whole genome shotgun sequence

⇒Summary: seq-len = 2967 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1104-1298 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 20: MPDY01001313.1 Clostridioides difficile strain NT513 contig_1314, whole genome shotgun sequence

⇒Summary: seq-len = 209 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12-172 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 21: MPDY01000328.1 Clostridioides difficile strain NT513 contig_328, whole genome shotgun sequence

⇒Summary: seq-len = 5143 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-154 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 22: MPDY01000287.1 Clostridioides difficile strain NT513 contig_287, whole genome shotgun sequence

⇒Summary: seq-len = 1068 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8-764 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 23: MPDY01000291.1 Clostridioides difficile strain NT513 contig_291, whole genome shotgun sequence

⇒Summary: seq-len = 3674 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1823-2112 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 24: MPDY01000603.1 Clostridioides difficile strain NT513 contig_604, whole genome shotgun sequence

⇒Summary: seq-len = 2205 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 179-865 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)