CRISPRone

CRISPRone report for GCA_003475745.1_ASM347574v1

♦ Seq 1: QRPZ01000014.1 Bacteroides fragilis strain AF33-30 AF33-30.Scaf14, whole genome shotgun sequence

⇒Summary: seq-len = 82344 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-6886 bp Zoom in on locus 1 x3 CRISPR array Location: 0-164 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 0-164 bp Num of repeats: 3 Spacers: s1-s2 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 273-605 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 609-1541 bp Gene: unk Type: unknown Location: 1661-1969 bp Gene: unk Type: unknown Location: 2036-2560 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 2576-6886 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-164 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QRPZ01000091.1 Bacteroides fragilis strain AF33-30 AF33-30.Scaf91, whole genome shotgun sequence

⇒Summary: seq-len = 14093 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 190-419 bp Zoom in on locus 1 x3 CRISPR array Location: 190-419 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 190-419 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 190-419 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QRPZ01000094.1 Bacteroides fragilis strain AF33-30 AF33-30.Scaf94, whole genome shotgun sequence

⇒Summary: seq-len = 12878 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2179-2326 bp Zoom in on locus 1 x3 CRISPR array Location: 2179-2326 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 2179-2326 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2179-2326 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)