CRISPRone

CRISPRone report for GCA_004798445.1_ASM479844v1

♦ Seq 1: SSKL01000748.1 Bacteroides fragilis strain BFR_KZ01 NODE_750_length_217_cov_1.16102_ID_1499, whole genome shotgun sequence

⇒Summary: seq-len = 217 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29-235 bp Zoom in on locus 1 x4 CRISPR array Location: 29-235 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 29-235 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 29-235 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SSKL01000010.1 Bacteroides fragilis strain BFR_KZ01 NODE_10_length_163021_cov_10.1475_ID_19, whole genome shotgun sequence

⇒Summary: seq-len = 163021 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 508-7743 bp Zoom in on locus 1 x7 CRISPR array Location: 508-1020 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 508-1020 bp Num of repeats: 7 Spacers: s1-s6 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 1131-1463 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 1467-2399 bp Gene: unk Type: unknown Location: 2519-2827 bp Gene: unk Type: unknown Location: 3025-3417 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 3433-7743 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 508-1020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SSKL01000002.1 Bacteroides fragilis strain BFR_KZ01 NODE_2_length_450808_cov_8.96591_ID_3, whole genome shotgun sequence

⇒Summary: seq-len = 450808 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 184179-184326 bp Zoom in on locus 1 x3 CRISPR array Location: 184179-184326 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 184179-184326 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 184179-184326 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)