CRISPRone

CRISPRone report for GCA_900002455.1_CD105HS10

♦ Seq 1: CCRX01000023.1 Peptoclostridium difficile genome assembly, contig: NODE_1143_length_259_cov_7.930502, whole genome shotgun sequence

⇒Summary: seq-len = 281 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-280 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CCRX01000212.1 Peptoclostridium difficile genome assembly, contig: NODE_884_length_16405_cov_10.403231, whole genome shotgun sequence

⇒Summary: seq-len = 16427 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15631-16426 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CCRX01000139.1 Peptoclostridium difficile genome assembly, contig: NODE_414_length_38639_cov_11.174332, whole genome shotgun sequence

⇒Summary: seq-len = 38661 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30091-30334 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CCRX01000182.1 Peptoclostridium difficile genome assembly, contig: NODE_643_length_87628_cov_9.672205, whole genome shotgun sequence

⇒Summary: seq-len = 87650 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 69970-70255 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CCRX01000078.1 Peptoclostridium difficile genome assembly, contig: NODE_184_length_7816_cov_8.797851, whole genome shotgun sequence

⇒Summary: seq-len = 7838 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-217 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CCRX01000007.1 Peptoclostridium difficile genome assembly, contig: NODE_1052_length_184926_cov_9.784286, whole genome shotgun sequence

⇒Summary: seq-len = 184948 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 184480-184890 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CCRX01000036.1 Peptoclostridium difficile genome assembly, contig: NODE_1287_length_63865_cov_9.755187, whole genome shotgun sequence

⇒Summary: seq-len = 63887 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2-348 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CCRX01000053.1 Peptoclostridium difficile genome assembly, contig: NODE_143_length_431863_cov_10.215497, whole genome shotgun sequence

⇒Summary: seq-len = 431885 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 275081-275429 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: CCRX01000020.1 Peptoclostridium difficile genome assembly, contig: NODE_1128_length_11804_cov_9.415198, whole genome shotgun sequence

⇒Summary: seq-len = 11826 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 58-1728 bp]: array | spacers
           [Locus range 211-372 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: CCRX01000081.1 Peptoclostridium difficile genome assembly, contig: NODE_1894_length_118178_cov_9.779840, whole genome shotgun sequence

⇒Summary: seq-len = 118200 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 117725-118201 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: CCRX01000071.1 Peptoclostridium difficile genome assembly, contig: NODE_1728_length_2144_cov_10.723414, whole genome shotgun sequence

⇒Summary: seq-len = 2166 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63-555 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: CCRX01000038.1 Peptoclostridium difficile genome assembly, contig: NODE_1300_length_607_cov_9.265239, whole genome shotgun sequence

⇒Summary: seq-len = 629 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 212-569 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: CCRX01000029.1 Peptoclostridium difficile genome assembly, contig: NODE_1201_length_236487_cov_10.257807, whole genome shotgun sequence

⇒Summary: seq-len = 236509 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: CCRX01000022.1 Peptoclostridium difficile genome assembly, contig: NODE_113_length_18608_cov_9.010856, whole genome shotgun sequence

⇒Summary: seq-len = 18630 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 531-755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)