CRISPRone

CRISPRone report for GCA_900002555.1_CD105HS19

♦ Seq 1: CCRT01000108.1 Peptoclostridium difficile genome assembly, contig: NODE_423_length_6819_cov_13.672386, whole genome shotgun sequence

⇒Summary: seq-len = 6845 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-840 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CCRT01000187.1 Peptoclostridium difficile genome assembly, contig: NODE_925_length_7771_cov_15.367392, whole genome shotgun sequence

⇒Summary: seq-len = 7797 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4538-4694 bp]: array | spacers
           [Locus range 4785-5137 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CCRT01000161.1 Peptoclostridium difficile genome assembly, contig: NODE_726_length_63812_cov_15.617126, whole genome shotgun sequence

⇒Summary: seq-len = 63838 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3415-3838 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CCRT01000046.1 Peptoclostridium difficile genome assembly, contig: NODE_1591_length_59591_cov_17.730984, whole genome shotgun sequence

⇒Summary: seq-len = 59617 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 51072-51315 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CCRT01000043.1 Peptoclostridium difficile genome assembly, contig: NODE_1565_length_155907_cov_16.238251, whole genome shotgun sequence

⇒Summary: seq-len = 155933 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 89784-91422 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CCRT01000094.1 Peptoclostridium difficile genome assembly, contig: NODE_372_length_215014_cov_16.492485, whole genome shotgun sequence

⇒Summary: seq-len = 215040 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185120-185418 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CCRT01000120.1 Peptoclostridium difficile genome assembly, contig: NODE_482_length_232024_cov_16.592594, whole genome shotgun sequence

⇒Summary: seq-len = 232050 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CCRT01000149.1 Peptoclostridium difficile genome assembly, contig: NODE_663_length_34144_cov_14.194383, whole genome shotgun sequence

⇒Summary: seq-len = 34170 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5021-5313 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: CCRT01000022.1 Peptoclostridium difficile genome assembly, contig: NODE_1320_length_28305_cov_15.521639, whole genome shotgun sequence

⇒Summary: seq-len = 28331 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17657-18211 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)