CRISPRone

CRISPRone report for GCA_900006345.1_CD105HS1

♦ Seq 1: CCRR01000115.1 Peptoclostridium difficile genome assembly, contig: NODE_2568_length_243859_cov_13.678872, whole genome shotgun sequence

⇒Summary: seq-len = 243885 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 148815-149901 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CCRR01000170.1 Peptoclostridium difficile genome assembly, contig: NODE_402_length_7364_cov_10.455595, whole genome shotgun sequence

⇒Summary: seq-len = 7390 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4832-5726 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: CCRR01000072.1 Peptoclostridium difficile genome assembly, contig: NODE_2028_length_65035_cov_15.201553, whole genome shotgun sequence

⇒Summary: seq-len = 65061 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56510-56753 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: CCRR01000082.1 Peptoclostridium difficile genome assembly, contig: NODE_2189_length_122151_cov_12.777030, whole genome shotgun sequence

⇒Summary: seq-len = 122177 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 121888-122181 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: CCRR01000016.1 Peptoclostridium difficile genome assembly, contig: NODE_1194_length_175064_cov_13.356961, whole genome shotgun sequence

⇒Summary: seq-len = 175090 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 4-218 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: CCRR01000092.1 Peptoclostridium difficile genome assembly, contig: NODE_2306_length_68380_cov_13.832421, whole genome shotgun sequence

⇒Summary: seq-len = 68406 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 67265-68345 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: CCRR01000062.1 Peptoclostridium difficile genome assembly, contig: NODE_1869_length_7908_cov_10.365326, whole genome shotgun sequence

⇒Summary: seq-len = 7934 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3410-4499 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: CCRR01000181.1 Peptoclostridium difficile genome assembly, contig: NODE_459_length_64124_cov_13.018137, whole genome shotgun sequence

⇒Summary: seq-len = 64150 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-558 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: CCRR01000109.1 Peptoclostridium difficile genome assembly, contig: NODE_2504_length_28082_cov_11.538601, whole genome shotgun sequence

⇒Summary: seq-len = 28108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17699-17991 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: CCRR01000113.1 Peptoclostridium difficile genome assembly, contig: NODE_2537_length_1281_cov_8.273224, whole genome shotgun sequence

⇒Summary: seq-len = 1307 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 94-294 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: CCRR01000060.1 Peptoclostridium difficile genome assembly, contig: NODE_1820_length_13876_cov_11.315797, whole genome shotgun sequence

⇒Summary: seq-len = 13902 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 664-823 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)