CRISPRone

CRISPRone report for GCA_900227845.1_SRR1027519

♦ Seq 1: OCGB01001168.1 Bacteroides fragilis NCTC 9343 genome assembly, contig: NODE_1168_length_1332_cov_1.64605, whole genome shotgun sequence

⇒Summary: seq-len = 1332 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1180 bp Zoom in on locus 1 Gene: cd09719:cas1 Type: universal Location: 1-894 bp Gene: cd09648:cas2 Type: universal Location: 896-1180 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: OCGB01001677.1 Bacteroides fragilis NCTC 9343 genome assembly, contig: NODE_1677_length_921_cov_1.77714, whole genome shotgun sequence

⇒Summary: seq-len = 921 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 548-881 bp Zoom in on locus 1 x6 CRISPR array Location: 548-881 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 548-881 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 548-881 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: OCGB01000725.1 Bacteroides fragilis NCTC 9343 genome assembly, contig: NODE_725_length_1844_cov_1.42146, whole genome shotgun sequence

⇒Summary: seq-len = 1844 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 244-637 bp Zoom in on locus 1 x7 CRISPR array Location: 244-637 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 244-637 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 244-637 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: OCGB01001532.1 Bacteroides fragilis NCTC 9343 genome assembly, contig: NODE_1532_length_1032_cov_1.63971, whole genome shotgun sequence

⇒Summary: seq-len = 1032 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-1005 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 3-419 bp Gene: cd09664:cas6e Type: Subtype-I-E Location: 406-1005 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: OCGB01000539.1 Bacteroides fragilis NCTC 9343 genome assembly, contig: NODE_539_length_2222_cov_1.75588, whole genome shotgun sequence

⇒Summary: seq-len = 2222 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-2221 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 2-259 bp Gene: cd09646:cas7 Type: Subtype-I-E Location: 262-1353 bp Gene: cd09670:cse2gr11 Type: Subtype-I-E Location: 1366-1848 bp Gene: cd09669:cas8e Type: Subtype-I-E Location: 1841-2221 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: OCGB01003009.1 Bacteroides fragilis NCTC 9343 genome assembly, contig: NODE_3009_length_334_cov_0.78853, whole genome shotgun sequence

⇒Summary: seq-len = 334 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-333 bp Zoom in on locus 1 x6 CRISPR array Location: 0-333 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 0-333 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-333 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)