CRISPRone

CRISPRone report for GCA_000009925.1_ASM992v1

♦ Seq 1: AP006841.1 Bacteroides fragilis YCH46 DNA, complete genome

⇒Summary: seq-len = 5277274 bp; # of CRISPR array = 1; # of cas gene = 12  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2924388-2932856 bp 2 Locus 2: 3957832-3959963 bp 3 Locus 3: 4081634-4085247 bp Zoom in on locus 1 x10 Zoom in on locus 2 Zoom in on locus 3 CRISPR array Location: 2924388-2924995 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 2924388-2924995 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09725:cas2 Type: universal Location: 2925208-2925471 bp Gene: cd09722:cas1 Type: universal Location: 2925474-2926487 bp Gene: pfam01930:cas4 Type: Type-I Location: 2926484-2927041 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 2927061-2928119 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 2928132-2929457 bp Gene: COG1203:cas3 Type: Type-I Location: 2929461-2931620 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 2931610-2932173 bp Gene: cd09652:cas6 Type: other Location: 2932185-2932856 bp Gene: mkCas0090:PD-DExK Type: other Location: 3957832-3958623 bp Gene: unk Type: unknown Location: 3958672-3959529 bp Gene: cd09680:cas10 Type: Type-III Location: 3959748-3959963 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 4081634-4082302 bp Gene: unk Type: unknown Location: 4082305-4083078 bp Gene: unk Type: unknown Location: 4083086-4084351 bp Gene: pfam13280:WYL Type: other Location: 4084348-4085247 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2924388-2924995 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)