CRISPRone

CRISPRone report for GCA_000017205.1_ASM1720v1

♦ Seq 1: CP000744.1 Pseudomonas aeruginosa PA7, complete genome

⇒Summary: seq-len = 6588339 bp; # of CRISPR array = 2; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1204501-1204829 bp 2 Locus 2: 2886935-2887203 bp 3 Locus 3: 6246041-6254302 bp Zoom in on locus 1 x6 Zoom in on locus 2 x5 Zoom in on locus 3 CRISPR array Location: 1204501-1204829 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 1204501-1204829 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 2886935-2887203 bp Num of repeats: 5 Spacers: s6-s9 CRISPR array Location: 2886935-2887203 bp Num of repeats: 5 Spacers: s6-s9 Gene: COG1199:DinG Type: Subtype-IV-A Location: 6246041-6248407 bp Gene: unk Type: unknown Location: 6248800-6249378 bp Gene: unk Type: unknown Location: 6249522-6249677 bp Gene: COG2378:WYL Type: other Location: 6249931-6250773 bp Gene: pfam13280:WYL Type: other Location: 6251761-6252531 bp Gene: mkCas0115:csx3 Type: other Location: 6252692-6254302 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1204501-1204829 bp]: array | spacers
           [Locus range 2886935-2887203 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)