CRISPRone

CRISPRone report for GCA_000025985.1_ASM2598v1

♦ Seq 1: CR626927.1 Bacteroides fragilis NCTC 9343, complete genome

⇒Summary: seq-len = 5205140 bp; # of CRISPR array = 2; # of cas gene = 9  (type I, II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2998004-3000320 bp 2 Locus 2: 3986134-3989747 bp 3 Locus 3: 4661170-4670042 bp Zoom in on locus 1 x9 Zoom in on locus 2 Zoom in on locus 3 x27 CRISPR array Location: 2998004-2998546 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 2998004-2998546 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09725:cas2 Type: universal Location: 2998759-2999022 bp Gene: cd09722:cas1 Type: universal Location: 2999025-2999264 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 2999257-2999637 bp Gene: cd09652:cas6 Type: other Location: 2999649-3000320 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 3986134-3986802 bp Gene: unk Type: unknown Location: 3986805-3987578 bp Gene: unk Type: unknown Location: 3987586-3988851 bp Gene: pfam13280:WYL Type: other Location: 3988848-3989747 bp CRISPR array Location: 4661170-4663207 bp Num of repeats: 27 Spacers: s9-s34 CRISPR array Location: 4661170-4663207 bp Num of repeats: 27 Spacers: s9-s34 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 4663316-4663648 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 4663652-4664584 bp Gene: unk Type: unknown Location: 4664704-4665012 bp Gene: unk Type: unknown Location: 4665079-4665603 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4665619-4669929 bp antiRepeat Location: 4669997-4670042 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2998004-2998546 bp]: array | spacers
           [Locus range 4661170-4663207 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)