CRISPRone

CRISPRone report for GCA_000152525.1_ASM15252v1

♦ Seq 1: CH482383.1 Pseudomonas aeruginosa C3719 supercont1.1 genomic scaffold, whole genome shotgun sequence

⇒Summary: seq-len = 6222097 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1506094-1516112 bp 2 Locus 2: 2791137-2792186 bp Zoom in on locus 1 x12 x13 Zoom in on locus 2 x18 CRISPR array Location: 1506094-1506782 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 1506094-1506782 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 1507042-1508016 bp Gene: COG1203:cas3 Type: Type-I Location: 1508013-1511243 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1511301-1512605 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1512592-1513575 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1513586-1514614 bp Gene: cd09739:cas6f Type: other Location: 1514618-1515181 bp CRISPR array Location: 1515365-1516112 bp Num of repeats: 13 Spacers: s12-s23 CRISPR array Location: 1515365-1516112 bp Num of repeats: 13 Spacers: s12-s23 CRISPR array Location: 2791137-2792186 bp Num of repeats: 18 Spacers: s24-s40 CRISPR array Location: 2791137-2792186 bp Num of repeats: 18 Spacers: s24-s40 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1506094-1506782 bp]: array | spacers
           [Locus range 1515365-1516112 bp]: array | spacers
           [Locus range 2791137-2792186 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)