CRISPRone

CRISPRone report for GCA_000210835.1_ASM21083v1

♦ Seq 1: FQ312004.1 Bacteroides fragilis 638R genome

⇒Summary: seq-len = 5373121 bp; # of CRISPR array = 1; # of cas gene = 8  (type I, II, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2368770-2378050 bp 2 Locus 2: 4024055-4027668 bp 3 Locus 3: 4711685-4720679 bp Zoom in on locus 1 Zoom in on locus 2 Zoom in on locus 3 x30 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 2368770-2369582 bp Gene: unk Type: unknown Location: 2369617-2369778 bp Gene: unk Type: unknown Location: 2369919-2370095 bp Gene: pfam13280:WYL Type: other Location: 2370861-2371871 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 2371910-2378050 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 4024055-4024723 bp Gene: unk Type: unknown Location: 4024726-4025499 bp Gene: unk Type: unknown Location: 4025507-4026772 bp Gene: pfam13280:WYL Type: other Location: 4026769-4027668 bp CRISPR array Location: 4711685-4713958 bp Num of repeats: 30 Spacers: s1-s29 CRISPR array Location: 4711685-4713958 bp Num of repeats: 30 Spacers: s1-s29 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 4714067-4714399 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 4714403-4715335 bp Gene: unk Type: unknown Location: 4715455-4715763 bp Gene: unk Type: unknown Location: 4715961-4716353 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4716369-4720679 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4711685-4713958 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)