CRISPRone

CRISPRone report for GCA_000220025.2_ASM22002v2

♦ Seq 1: AFNF01000669.1 Pseudomonas aeruginosa AES-1R contig00669, whole genome shotgun sequence

⇒Summary: seq-len = 3474 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1347-1741 bp Zoom in on locus 1 x7 CRISPR array Location: 1347-1741 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 1347-1741 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1347-1741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AFNF01000091.1 Pseudomonas aeruginosa AES-1R contig00091, whole genome shotgun sequence

⇒Summary: seq-len = 10807 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8586-10806 bp Zoom in on locus 1 x19 CRISPR array Location: 8586-9714 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 8586-9714 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 9779-10078 bp Gene: COG1518:cas1 Type: universal Location: 10075-10806 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8586-9714 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AFNF01000489.1 Pseudomonas aeruginosa AES-1R contig00489, whole genome shotgun sequence

⇒Summary: seq-len = 4522 bp; # of CRISPR array = 0; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-4521 bp Zoom in on locus 1 Gene: pfam09481:cas8e Type: Subtype-I-E Location: 1-1416 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 1413-1943 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 1953-3095 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 3097-3759 bp Gene: pfam08798:cas6e Type: other Location: 3734-4345 bp Gene: cd09719:cas1 Type: universal Location: 4372-4521 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)