CRISPRone

CRISPRone report for GCA_000226155.1_ASM22615v1

♦ Seq 1: CP002496.1 Pseudomonas aeruginosa M18, complete genome

⇒Summary: seq-len = 6327754 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1542032-1543020 bp 2 Locus 2: 2878171-2888252 bp Zoom in on locus 1 x17 Zoom in on locus 2 x14 x12 CRISPR array Location: 1542032-1543020 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 1542032-1543020 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 2878171-2878979 bp Num of repeats: 14 Spacers: s17-s29 CRISPR array Location: 2878171-2878979 bp Num of repeats: 14 Spacers: s17-s29 Gene: cd09739:cas6f Type: other Location: 2879161-2879724 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2879728-2880756 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2880767-2881750 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2881737-2883041 bp Gene: COG1203:cas3 Type: Type-I Location: 2883099-2886329 bp Gene: cd09718:cas1 Type: universal Location: 2886326-2887300 bp CRISPR array Location: 2887565-2888252 bp Num of repeats: 12 Spacers: s30-s40 CRISPR array Location: 2887565-2888252 bp Num of repeats: 12 Spacers: s30-s40 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1542032-1543020 bp]: array | spacers
           [Locus range 2878171-2878979 bp]: array | spacers
           [Locus range 2887565-2888252 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)