CRISPRone

CRISPRone report for GCA_000259025.1_ASM25902v1

♦ Seq 1: AJHI01000055.1 Pseudomonas aeruginosa PADK2_CF510 contig055, whole genome shotgun sequence

⇒Summary: seq-len = 557745 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 214040-214728 bp Zoom in on locus 1 x12 CRISPR array Location: 214040-214728 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 214040-214728 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 214040-214728 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AJHI01000009.1 Pseudomonas aeruginosa PADK2_CF510 contig009, whole genome shotgun sequence

⇒Summary: seq-len = 772924 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 696604-705434 bp Zoom in on locus 1 x9 CRISPR array Location: 696604-697113 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 696604-697113 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09739:cas6f Type: other Location: 697297-697860 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 697864-698892 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 698903-699886 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 699873-700982 bp Gene: COG1203:cas3 Type: Type-I Location: 700882-704463 bp Gene: cd09718:cas1 Type: universal Location: 704460-705434 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 696604-697113 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)