CRISPRone

CRISPRone report for GCA_000271365.1_ASM27136v1

♦ Seq 1: CP003149.1 Pseudomonas aeruginosa DK2, complete genome

⇒Summary: seq-len = 6402658 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1398760-1399448 bp 2 Locus 2: 2794688-2804768 bp Zoom in on locus 1 x12 Zoom in on locus 2 x9 x17 CRISPR array Location: 1398760-1399448 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 1398760-1399448 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2794688-2795197 bp Num of repeats: 9 Spacers: s12-s19 CRISPR array Location: 2794688-2795197 bp Num of repeats: 9 Spacers: s12-s19 Gene: cd09739:cas6f Type: other Location: 2795381-2795944 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2795948-2796976 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2796987-2797970 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2797957-2799261 bp Gene: COG1203:cas3 Type: Type-I Location: 2799319-2802549 bp Gene: cd09718:cas1 Type: universal Location: 2802546-2803520 bp CRISPR array Location: 2803781-2804768 bp Num of repeats: 17 Spacers: s20-s35 CRISPR array Location: 2803781-2804768 bp Num of repeats: 17 Spacers: s20-s35 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1398760-1399448 bp]: array | spacers
           [Locus range 2794688-2795197 bp]: array | spacers
           [Locus range 2803781-2804768 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)