CRISPRone

CRISPRone report for GCA_000271985.2_ASM27198v2

♦ Seq 1: CP015877.1 Pseudomonas aeruginosa SJTD-1, complete genome

⇒Summary: seq-len = 6243825 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4466205-4475925 bp 2 Locus 2: 5782574-5783500 bp Zoom in on locus 1 x7 x13 Zoom in on locus 2 x16 CRISPR array Location: 4466205-4466595 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 4466205-4466595 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09718:cas1 Type: universal Location: 4466855-4467829 bp Gene: COG1203:cas3 Type: Type-I Location: 4467826-4471056 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4471114-4472418 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 4472405-4473388 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 4473399-4474427 bp Gene: cd09739:cas6f Type: other Location: 4474431-4474994 bp CRISPR array Location: 4475178-4475925 bp Num of repeats: 13 Spacers: s7-s18 CRISPR array Location: 4475178-4475925 bp Num of repeats: 13 Spacers: s7-s18 CRISPR array Location: 5782574-5783500 bp Num of repeats: 16 Spacers: s19-s33 CRISPR array Location: 5782574-5783500 bp Num of repeats: 16 Spacers: s19-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4466205-4466595 bp]: array | spacers
           [Locus range 4475178-4475925 bp]: array | spacers
           [Locus range 5782574-5783500 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)