CRISPRone

CRISPRone report for GCA_000297315.1_ASM29731v1

♦ Seq 1: AKZF01000131.1 Pseudomonas aeruginosa ATCC 700888 Contig0135, whole genome shotgun sequence

⇒Summary: seq-len = 17532 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 278-546 bp Zoom in on locus 1 x5 CRISPR array Location: 278-546 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 278-546 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 278-546 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AKZF01000299.1 Pseudomonas aeruginosa ATCC 700888 Contig0303, whole genome shotgun sequence

⇒Summary: seq-len = 20527 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 149-10734 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 149-1018 bp Gene: pfam00078:RT Type: other Location: 5927-7195 bp Gene: unk Type: unknown Location: 7345-7743 bp Gene: unk Type: unknown Location: 7927-8106 bp Gene: cls000170:cas4 Type: Type-I Location: 9190-10734 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)