CRISPRone

CRISPRone report for GCA_000297335.1_ASM29733v1

♦ Seq 1: AKZG01000072.1 Pseudomonas aeruginosa CI27 Contig0075, whole genome shotgun sequence

⇒Summary: seq-len = 85308 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53184-63628 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 53184-53872 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 53184-53872 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 54121-54684 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 54688-55716 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 55727-56710 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 56697-58001 bp Gene: COG1203:cas3 Type: Type-I Location: 58059-61289 bp Gene: cd09718:cas1 Type: universal Location: 61286-62260 bp CRISPR array Location: 62521-63628 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 62521-63628 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53184-53872 bp]: array | spacers
           [Locus range 62521-63628 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)