CRISPRone

CRISPRone report for GCA_000297735.1_Bact_frag_HMW_615_V1

♦ Seq 1: JH815492.1 Bacteroides fragilis HMW 615 genomic scaffold supercont1.2, whole genome shotgun sequence

⇒Summary: seq-len = 1560650 bp; # of CRISPR array = 1; # of cas gene = 12  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 82665-86278 bp 2 Locus 2: 1337756-1351488 bp Zoom in on locus 1 Zoom in on locus 2 x2 Gene: pfam13280:WYL Type: other Location: 82665-83564 bp Gene: unk Type: unknown Location: 83561-84826 bp Gene: unk Type: unknown Location: 84834-85607 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 85610-86278 bp CRISPR array Location: 1337756-1337860 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1337756-1337860 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09725:cas2 Type: universal Location: 1338308-1338598 bp Gene: cd09634:cas1 Type: universal Location: 1338592-1340862 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 1340882-1341826 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 1341829-1342239 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 1342252-1343091 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1343111-1344250 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 1344243-1346045 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 1346050-1347459 bp Gene: unk Type: unknown Location: 1347473-1347952 bp Gene: cash17:cash17 Type: Type- Location: 1347949-1349376 bp Gene: unk Type: unknown Location: 1349421-1350200 bp Gene: unk Type: unknown Location: 1350176-1350802 bp Gene: cls000004:cas6 Type: other Location: 1350820-1351488 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1337756-1337860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)