CRISPRone

CRISPRone report for GCA_000342145.1_PA_21_ST175v1

♦ Seq 1: AOIH01000025.1 Pseudomonas aeruginosa PA21_ST175 contig00025, whole genome shotgun sequence

⇒Summary: seq-len = 84616 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61359-68147 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 61359-62390 bp Gene: unk Type: unknown Location: 62835-63725 bp Gene: pfam13280:WYL Type: other Location: 64005-64913 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 64926-68147 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AOIH01000002.1 Pseudomonas aeruginosa PA21_ST175 contig00002, whole genome shotgun sequence

⇒Summary: seq-len = 605712 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 194451-195259 bp Zoom in on locus 1 x14 CRISPR array Location: 194451-195259 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 194451-195259 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 194451-195259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)