CRISPRone

CRISPRone report for GCA_000404265.1_Pseu_aeru_PA14_V1

♦ Seq 1: KE136335.1 Pseudomonas aeruginosa PA14 genomic scaffold acUKH-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 5522862 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2632964-2643649 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 2632964-2634253 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 2632964-2634253 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 2634513-2635487 bp Gene: COG1203:cas3 Type: Type-I Location: 2635484-2638714 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2638772-2640076 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2640063-2641046 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2641057-2642085 bp Gene: cd09739:cas6f Type: other Location: 2642089-2642652 bp CRISPR array Location: 2642902-2643649 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 2642902-2643649 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2632964-2634253 bp]: array | spacers
           [Locus range 2642902-2643649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)