CRISPRone

CRISPRone report for GCA_000412455.1_PA_17

♦ Seq 1: ASQY01000540.1 Pseudomonas aeruginosa str. PA 17 contig540, whole genome shotgun sequence

⇒Summary: seq-len = 211 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-209 bp Zoom in on locus 1 x4 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-209 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: ASQY01000520.1 Pseudomonas aeruginosa str. PA 17 contig520, whole genome shotgun sequence

⇒Summary: seq-len = 1945 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1943 bp Zoom in on locus 1 x7 CRISPR array Location: 1-389 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 1-389 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09739:cas6f Type: other Location: 573-1136 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1140-1943 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-389 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)