CRISPRone

CRISPRone report for GCA_000412515.1_J_1385

♦ Seq 1: ASRB01002349.1 Pseudomonas aeruginosa str. J 1385 contig2349, whole genome shotgun sequence

⇒Summary: seq-len = 317 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-318 bp Zoom in on locus 1 x6 CRISPR array Location: 0-318 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 0-318 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-318 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: ASRB01000863.1 Pseudomonas aeruginosa str. J 1385 contig863, whole genome shotgun sequence

⇒Summary: seq-len = 8433 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-8431 bp Zoom in on locus 1 x6 CRISPR array Location: 0-319 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 0-319 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09739:cas6f Type: other Location: 568-1131 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1135-2163 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2174-3157 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3144-4448 bp Gene: COG1203:cas3 Type: Type-I Location: 4506-7736 bp Gene: COG1518:cas1 Type: universal Location: 7733-8431 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-319 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)