CRISPRone

CRISPRone report for GCA_000414035.1_ASM41403v1

♦ Seq 1: CP006245.1 Pseudomonas aeruginosa RP73, complete genome

⇒Summary: seq-len = 6342034 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1409002-1420915 bp Zoom in on locus 1 x21 x24 CRISPR array Location: 1409002-1410252 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 1409002-1410252 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09641:cas3HD Type: Type-I Location: 1411024-1413705 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 1413708-1415276 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 1415273-1415803 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 1415813-1416955 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 1416957-1417619 bp Gene: pfam08798:cas6e Type: other Location: 1417594-1418205 bp Gene: cd09719:cas1 Type: universal Location: 1418232-1419122 bp Gene: pfam09707:cas2 Type: universal Location: 1419119-1419418 bp CRISPR array Location: 1419483-1420915 bp Num of repeats: 24 Spacers: s21-s43 CRISPR array Location: 1419483-1420915 bp Num of repeats: 24 Spacers: s21-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1409002-1410252 bp]: array | spacers
           [Locus range 1419483-1420915 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)