CRISPRone

CRISPRone report for GCA_000448745.2_ASM44874v2

♦ Seq 1: AVGO01000104.1 Clostridioides difficile CD21 gcdCD21.contig.103, whole genome shotgun sequence

⇒Summary: seq-len = 38765 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34965-35581 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVGO01000054.1 Clostridioides difficile CD21 gcdCD21.contig.53, whole genome shotgun sequence

⇒Summary: seq-len = 94512 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34523-35082 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVGO01000129.1 Clostridioides difficile CD21 gcdCD21.contig.128, whole genome shotgun sequence

⇒Summary: seq-len = 19559 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8659-8752 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVGO01000108.1 Clostridioides difficile CD21 gcdCD21.contig.107, whole genome shotgun sequence

⇒Summary: seq-len = 63051 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVGO01000059.1 Clostridioides difficile CD21 gcdCD21.contig.58, whole genome shotgun sequence

⇒Summary: seq-len = 14347 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3085-3842 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVGO01000066.1 Clostridioides difficile CD21 gcdCD21.contig.65, whole genome shotgun sequence

⇒Summary: seq-len = 4894 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3593-4743 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVGO01000087.1 Clostridioides difficile CD21 gcdCD21.contig.86, whole genome shotgun sequence

⇒Summary: seq-len = 19653 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1998-2158 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVGO01000123.1 Clostridioides difficile CD21 gcdCD21.contig.122, whole genome shotgun sequence

⇒Summary: seq-len = 111197 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90454-92051 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVGO01000110.1 Clostridioides difficile CD21 gcdCD21.contig.109, whole genome shotgun sequence

⇒Summary: seq-len = 49124 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4179-4536 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)